Detailed information of OS493_014184-T1 in Lophelia pertusa

Genomic Location: scaffold_40:174365...190079
NR annotation: KAJ7373040.1, hypothetical protein OS493_014184 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95LD9Aryl hydrocarbon receptor OS=Delphinapterus leucas OX=9749 GN=AHR PE=2 SV=1
P35869Aryl hydrocarbon receptor OS=Homo sapiens OX=9606 GN=AHR PE=1 SV=2
Q8R4S2Aryl hydrocarbon receptor OS=Mus spretus OX=10096 GN=Ahr PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003728 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010
all species →		HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00989
all species →		PASPAS foldDomainInterproscan
PF08447
all species →		PAS_3PAS foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014
all species →		DomainPAS domainInterproscan
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638
all species →		Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR013767
all species →		DomainPAS foldInterproscan
IPR013655
all species →		DomainPAS fold-3Interproscan
IPR035965
all species →		Homologous_superfamilyPAS domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23043
all species →		HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan
GO:0000977
all species →		Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014184-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014184-T1 global co-expression network
TOP