Detailed information of OS493_014314-T1 in Lophelia pertusa

Genomic Location: scaffold_40:2021649...2024569
NR annotation: KAJ7373166.1, diphthine--ammonia ligase [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2HJF5Diphthine--ammonia ligase OS=Bos taurus OX=9913 GN=DPH6 PE=2 SV=1
Q5M9F5Diphthine--ammonia ligase OS=Rattus norvegicus OX=10116 GN=Dph6 PE=2 SV=1
Q7L8W6Diphthine--ammonia ligase OS=Homo sapiens OX=9606 GN=DPH6 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003436 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01902
all species →		Diphthami_syn_2Diphthamide synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030662
all species →		FamilyDiphthine--ammonia ligase/Uncharacterised protein MJ0570Interproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002761
all species →		DomainDiphthamide synthase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12196
all species →		DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0017178
all species →		Molecular Functiondiphthine-ammonia ligase activityInterproscan
GO:0017183
all species →		Biological Processprotein histidyl modification to diphthamideInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06927DPH6; diphthine-ammonia ligaseEC:6.3.1.14
Translation factorsko03012deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014314-T1 global co-expression network
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