Detailed information of OS493_014429-T1 in Lophelia pertusa

Genomic Location: scaffold_41:657989...665105
NR annotation: KAJ7361788.1, hypothetical protein OS493_014429 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q557E7E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum OX=44689 GN=cblA-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000109 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46858
all species →		OS05G0521000 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007049
all species →		Biological Processcell cycleInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014429-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014429-T1 global co-expression network
TOP