Gene detail

Detailed information of OS493_014483-T1 in Lophelia pertusa

Genomic Location: scaffold_41:1098000...1103302
NR annotation: KAJ7361841.1, hypothetical protein OS493_014483 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C1B1	Calmodulin-regulated spectrin-associated protein 2 OS=Mus musculus OX=10090 GN=Camsap2 PE=1 SV=3
D4AEC2	Calmodulin-regulated spectrin-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Camsap2 PE=1 SV=1
Q08AD1	Calmodulin-regulated spectrin-associated protein 2 OS=Homo sapiens OX=9606 GN=CAMSAP2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002025 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08683 all species →	CAMSAP_CKK	Microtubule-binding calmodulin-regulated spectrin-associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011033 all species →	Homologous_superfamily	PRC-barrel-like superfamily	Interproscan
IPR014797 all species →	Domain	CKK domain	Interproscan
IPR032940 all species →	Family	Calmodulin-regulated spectrin-associated protein	Interproscan
IPR038209 all species →	Homologous_superfamily	CKK domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21595 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0007026 all species →	Biological Process	negative regulation of microtubule depolymerization	Interproscan
GO:0031122 all species →	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0036449 all species →	Cellular Component	microtubule minus-end	Interproscan
GO:0051011 all species →	Molecular Function	microtubule minus-end binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_014483-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_014483-T1 global co-expression network