Detailed information of OS493_014485-T1 in Lophelia pertusa

Genomic Location: scaffold_41:1106835...1128673
NR annotation: KAJ7361843.1, hypothetical protein OS493_014485 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IRN6Calmodulin-regulated spectrin-associated protein 1 OS=Xenopus laevis OX=8355 GN=camsap1 PE=2 SV=1
Q5T5Y3Calmodulin-regulated spectrin-associated protein 1 OS=Homo sapiens OX=9606 GN=CAMSAP1 PE=1 SV=2
A2AHC3Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002025 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11971
all species →		CAMSAP_CHCAMSAP CH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR022613
all species →		DomainCalmodulin-regulated spectrin-associated protein-like, Calponin-homology domainInterproscan
IPR032940
all species →		FamilyCalmodulin-regulated spectrin-associated proteinInterproscan
IPR001715
all species →		DomainCalponin homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21595
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005516
all species →		Molecular Functioncalmodulin bindingInterproscan
GO:0007026
all species →		Biological Processnegative regulation of microtubule depolymerizationInterproscan
GO:0008017
all species →		Molecular Functionmicrotubule bindingInterproscan
GO:0031122
all species →		Biological Processcytoplasmic microtubule organizationInterproscan
GO:0036449
all species →		Cellular Componentmicrotubule minus-endInterproscan
GO:0051011
all species →		Molecular Functionmicrotubule minus-end bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014485-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014485-T1 global co-expression network
TOP