Detailed information of OS493_014487-T1 in Lophelia pertusa

Genomic Location: scaffold_41:1134964...1139834
NR annotation: KAJ7361845.1, hypothetical protein OS493_014487 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009122 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12874
all species →		zf-metZinc-finger of C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR003604
all species →		DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR051868
all species →		FamilyZinc finger protein 346 and matrin-type protein 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46144
all species →		ZINC FINGER PROTEIN 385B-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014487-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014487-T1 global co-expression network
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