Detailed information of OS493_014658-T1 in Lophelia pertusa

Genomic Location: scaffold_42:376203...381732
NR annotation: KAJ7334348.1, Ubiquitin-associated domain-containing protein 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28DG7Ubiquitin-associated domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubac1 PE=2 SV=1
Q5ZJI9Ubiquitin-associated domain-containing protein 1 OS=Gallus gallus OX=9031 GN=UBAC1 PE=2 SV=1
Q9BSL1Ubiquitin-associated domain-containing protein 1 OS=Homo sapiens OX=9606 GN=UBAC1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007148 (this species only)
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627
all species →		UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940
all species →		DomainUbiquitin-associated domainInterproscan
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan
IPR041926
all species →		DomainUBAC1, UBA domain 1Interproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR041927
all species →		DomainUBAC1, UBA domain 2Interproscan
IPR052476
all species →		FamilyUbiquitin-associated domain-containing protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46738
all species →		UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000151
all species →		Cellular Componentubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12174KPC2, UBAC1; Kip1 ubiquitination-promoting complex protein 2-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014658-T1 global co-expression network
TOP