Detailed information of OS493_014706-T1 in Lophelia pertusa

Genomic Location: scaffold_42:860887...866649
NR annotation: KAJ7334395.1, hypothetical protein OS493_014706 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7NXH5L-threonine 3-dehydrogenase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK) OX=243365 GN=tdh PE=3 SV=1
P38105Starvation-sensing protein RspB OS=Escherichia coli (strain K12) OX=83333 GN=rspB PE=2 SV=1
A0B459L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) OX=331272 GN=tdh PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009913 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00107
all species →		ADH_zinc_NZinc-binding dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR013149
all species →		DomainAlcohol dehydrogenase-like, C-terminalInterproscan
IPR050129
all species →		FamilyZinc-containing alcohol dehydrogenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43401
all species →		L-THREONINE 3-DEHYDROGENASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_014706-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014706-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014706-T1 global co-expression network
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