Gene detail

Detailed information of OS493_014736-T1 in Lophelia pertusa

Genomic Location: scaffold_42:1022480...1023715
NR annotation: KAJ7334422.1, hypothetical protein OS493_014736 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7T0W1	Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1
Q9UBK9	Protein UXT OS=Homo sapiens OX=9606 GN=UXT PE=1 SV=1
Q32P97	Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009928 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02996 all species →	Prefoldin	Prefoldin subunit	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003994 all species →	Family	Ubiquitously expressed transcript protein UXT	Interproscan
IPR009053 all species →	Homologous_superfamily	Prefoldin	Interproscan
IPR004127 all species →	Family	Prefoldin alpha-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13345 all species →	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26537	UXT; protein UXT	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_014736-T1 global co-expression network