Gene detail

Detailed information of OS493_014819-T1 in Lophelia pertusa

Genomic Location: scaffold_42:1781282...1783743
NR annotation: KAJ7334498.1, Kelch domain-containing protein 10 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5U580	Kelch domain-containing protein 10 OS=Xenopus laevis OX=8355 GN=klhdc10 PE=2 SV=1
Q28DE7	Kelch domain-containing protein 10 OS=Xenopus tropicalis OX=8364 GN=klhdc10 PE=2 SV=2
Q5U3Y0	Kelch domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Klhdc10 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002461 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13418 all species →	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan
PF13415 all species →	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011043 all species →	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan
IPR052125 all species →	Family	Kelch domain-containing protein 10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46428 all species →	KELCH DOMAIN-CONTAINING PROTEIN 10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0032874 all species →	Biological Process	positive regulation of stress-activated MAPK cascade	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25809	KLHDC10; kelch domain-containing protein 10	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_014819-T1 global co-expression network