Detailed information of OS493_014893-T1 in Lophelia pertusa

Genomic Location: scaffold_42:2540973...2544434
NR annotation: KAJ7334569.1, Peroxiredoxin-6 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZJF4Peroxiredoxin-6 OS=Gallus gallus OX=9031 GN=PRDX6 PE=2 SV=3
O77834Peroxiredoxin-6 OS=Bos taurus OX=9913 GN=PRDX6 PE=1 SV=3
P30041Peroxiredoxin-6 OS=Homo sapiens OX=9606 GN=PRDX6 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004515 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00578
all species →		AhpC-TSAAhpC/TSA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000866
all species →		DomainAlkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantInterproscan
IPR013766
all species →		DomainThioredoxin domainInterproscan
IPR036249
all species →		Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR045020
all species →		Family1-Cys peroxiredoxinInterproscan
IPR024706
all species →		FamilyPeroxiredoxin, AhpC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43503
all species →		MCG48959-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016209
all species →		Molecular Functionantioxidant activityInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0045454
all species →		Biological Processcell redox homeostasisInterproscan
GO:0051920
all species →		Molecular Functionperoxiredoxin activityInterproscan
GO:0098869
all species →		Biological Processcellular oxidant detoxificationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014893-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014893-T1 global co-expression network
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