Detailed information of OS493_014936-T1 in Lophelia pertusa

Genomic Location: scaffold_43:390058...391699
NR annotation: KAJ7392003.1, hypothetical protein OS493_014936 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008472 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13517
all species →		FG-GAP_3FG-GAP-like repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028994
all species →		Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517
all species →		RepeatFG-GAP repeatInterproscan
IPR027039
all species →		FamilyCartilage acidic protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16026
all species →		CARTILAGE ACIDIC PROTEIN 1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_014936-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014936-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014936-T1 global co-expression network
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