Detailed information of OS493_015162-T1 in Lophelia pertusa

Genomic Location: scaffold_44:1604326...1608377
NR annotation: KAJ7385579.1, Metal transporter cnnm2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H8M5Metal transporter CNNM2 OS=Homo sapiens OX=9606 GN=CNNM2 PE=1 SV=2
Q5U2P1Metal transporter CNNM2 OS=Rattus norvegicus OX=10116 GN=Cnnm2 PE=2 SV=1
Q3TWN3Metal transporter CNNM2 OS=Mus musculus OX=10090 GN=Cnnm2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001932 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01595
all species →		CNNMCyclin M transmembrane N-terminal domainDomainInterproscan
PF00571
all species →		CBSCBS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002550
all species →		DomainCNNM, transmembrane domainInterproscan
IPR046342
all species →		Homologous_superfamilyCBS domain superfamilyInterproscan
IPR018490
all species →		Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR000644
all species →		DomainCBS domainInterproscan
IPR045095
all species →		FamilyAncient conserved domain protein familyInterproscan
IPR044751
all species →		DomainIon transporter-like, CBS domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12064
all species →		METAL TRANSPORTER CNNMInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006810
all species →		Biological ProcesstransportInterproscan
GO:0010960
all species →		Biological Processmagnesium ion homeostasisInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0030026
all species →		Biological Processintracellular manganese ion homeostasisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16302CNNM; metal transporter CNNM-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_015162-T1 global co-expression network
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