Detailed information of OS493_015216-T1 in Lophelia pertusa

Genomic Location: scaffold_44:2403205...2404823
NR annotation: KAJ7385628.1, hypothetical protein OS493_015216 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P11966Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus OX=9913 GN=PDHB PE=1 SV=2
P49432Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2
Q9D051Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Pdhb PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004162 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02780
all species →		Transketolase_CTransketolase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027110
all species →		FamilyPyruvate dehydrogenase E1 component subunit betaInterproscan
IPR009014
all species →		Homologous_superfamilyTransketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIInterproscan
IPR033248
all species →		DomainTransketolase, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11624
all species →		DEHYDROGENASE RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004739
all species →		Molecular Functionpyruvate dehydrogenase (acetyl-transferring) activityInterproscan
GO:0005967
all species →		Cellular Componentobsolete mitochondrial pyruvate dehydrogenase complexInterproscan
GO:0006086
all species →		Biological Processacetyl-CoA biosynthetic process from pyruvateInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_015216-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_015216-T1 global co-expression network
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