Detailed information of OS493_015310-T1 in Lophelia pertusa

Genomic Location: scaffold_45:1155286...1175447
NR annotation: KAJ7379519.1, transcription initiation factor TFIID subunit 7 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2HJG8Transcription initiation factor TFIID subunit 7 OS=Bos taurus OX=9913 GN=TAF7 PE=2 SV=1
Q6R1L1Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1
Q15545Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005564 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04658
all species →		TAFII55_NTAFII55 protein conserved regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037817
all species →		FamilyTranscription initiation factor TFIID subunit 7Interproscan
IPR006751
all species →		DomainTAFII55 protein, conserved regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12228
all species →		TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005669
all species →		Cellular Componenttranscription factor TFIID complexInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0051123
all species →		Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_015310-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_015310-T1 global co-expression network
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