Gene detail

Detailed information of OS493_015331-T1 in Lophelia pertusa

Genomic Location: scaffold_45:1760773...1768218
NR annotation: KAJ7379539.1, V-type proton ATPase 16 kDa proteolipid subunit [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P63082	V-type proton ATPase 16 kDa proteolipid subunit c OS=Mus musculus OX=10090 GN=Atp6v0c PE=1 SV=1
P63081	V-type proton ATPase 16 kDa proteolipid subunit c OS=Rattus norvegicus OX=10116 GN=Atp6v0c PE=1 SV=1
Q03105	V-type proton ATPase 16 kDa proteolipid subunit c OS=Torpedo marmorata OX=7788 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007798 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00137 all species →	ATP-synt_C	ATP synthase subunit C	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035921 all species →	Homologous_superfamily	F/V-ATP synthase subunit C superfamily	Interproscan
IPR000245 all species →	Family	V-ATPase proteolipid subunit	Interproscan
IPR011555 all species →	Family	V-ATPase proteolipid subunit C, eukaryotic	Interproscan
IPR002379 all species →	Domain	V-ATPase proteolipid subunit C-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10263 all species →	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0033179 all species →	Cellular Component	proton-transporting V-type ATPase, V0 domain	Interproscan
GO:0046961 all species →	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0015078 all species →	Molecular Function	proton transmembrane transporter activity	Interproscan
GO:0033177 all species →	Cellular Component	proton-transporting two-sector ATPase complex, proton-transporting domain	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02155	ATPeV0C, ATP6L; V-type H+-transporting ATPase 16kDa proteolipid subunit	-	Rheumatoid arthritis	ko05323	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_015331-T1 global co-expression network