Detailed information of OS493_015770-T1 in Lophelia pertusa

Genomic Location: scaffold_48:353321...356260
NR annotation: KAJ7333688.1, Eukaryotic translation initiation factor 3 subunit E [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7RWP6Eukaryotic translation initiation factor 3 subunit E OS=Nematostella vectensis OX=45351 GN=v1g163572 PE=3 SV=1
Q1LUA8Eukaryotic translation initiation factor 3 subunit E-B OS=Danio rerio OX=7955 GN=eif3eb PE=3 SV=2
Q6DRI1Eukaryotic translation initiation factor 3 subunit E-A OS=Danio rerio OX=7955 GN=eif3ea PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005382 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09440
all species →		eIF3_NeIF3 subunit 6 N terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019010
all species →		DomainEukaryotic translation initiation factor 3 subunit E, N-terminalInterproscan
IPR016650
all species →		FamilyEukaryotic translation initiation factor 3 subunit EInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10317
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003743
all species →		Molecular Functiontranslation initiation factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005852
all species →		Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan
GO:0006413
all species →		Biological Processtranslational initiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_015770-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_015770-T1 global co-expression network
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