Detailed information of OS493_015853-T1 in Lophelia pertusa

Genomic Location: scaffold_48:1203746...1214371
NR annotation: KAJ7333762.1, hypothetical protein OS493_015853 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R8D0UDP-glucose 4-epimerase OS=Pongo abelii OX=9601 GN=GALE PE=2 SV=1
Q14376UDP-glucose 4-epimerase OS=Homo sapiens OX=9606 GN=GALE PE=1 SV=2
Q8R059UDP-glucose 4-epimerase OS=Mus musculus OX=10090 GN=Gale PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004276 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01370
all species →		EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR005886
all species →		FamilyUDP-glucose 4-epimeraseInterproscan
IPR001509
all species →		DomainNAD-dependent epimerase/dehydrataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43725
all species →		UDP-GLUCOSE 4-EPIMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003978
all species →		Molecular FunctionUDP-glucose 4-epimerase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0033499
all species →		Biological Processgalactose catabolic process via UDP-galactoseInterproscan
GO:0006012
all species →		Biological Processgalactose metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01784galE, GALE; UDP-glucose 4-epimeraseEC:5.1.3.2
O-Antigen nucleotide sugar biosynthesisko00541deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_015853-T1 global co-expression network
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