Detailed information of OS493_015988-T1 in Lophelia pertusa

Genomic Location: scaffold_48:2312600...2314554
NR annotation: KAJ7333895.1, hypothetical protein OS493_015988 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q84JE8Polynucleotide 3'-phosphatase ZDP OS=Arabidopsis thaliana OX=3702 GN=ZDP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002702 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08645
all species →		PNK3PPolynucleotide kinase 3 phosphataseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023214
all species →		Homologous_superfamilyHAD superfamilyInterproscan
IPR006549
all species →		DomainHAD-superfamily hydrolase,subfamily IIIAInterproscan
IPR036412
all species →		Homologous_superfamilyHAD-like superfamilyInterproscan
IPR013954
all species →		FamilyPolynucleotide kinase 3 phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12083
all species →		BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0046403
all species →		Molecular Functionpolynucleotide 3'-phosphatase activityInterproscan
GO:0046404
all species →		Molecular FunctionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activityInterproscan
GO:0046939
all species →		Biological Processobsolete nucleotide phosphorylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_015988-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_015988-T1 global co-expression network
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