Detailed information of OS493_016041-T1 in Lophelia pertusa

Genomic Location: scaffold_49:351536...365336
NR annotation: KAJ7391754.1, Extended synaptotagmin-3 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3TZZ7Extended synaptotagmin-2 OS=Mus musculus OX=10090 GN=Esyt2 PE=1 SV=1
A0FGR8Extended synaptotagmin-2 OS=Homo sapiens OX=9606 GN=ESYT2 PE=1 SV=1
Q7ZWU7Extended synaptotagmin-2-B OS=Xenopus laevis OX=8355 GN=esyt2-b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001220 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168
all species →		C2C2 domainDomainInterproscan
PF17047
all species →		SMP_LBDSynaptotagmin-like mitochondrial-lipid-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008
all species →		DomainC2 domainInterproscan
IPR035892
all species →		Homologous_superfamilyC2 domain superfamilyInterproscan
IPR051634
all species →		FamilyExtended SynaptotagminInterproscan
IPR037749
all species →		DomainExtended synaptotagmin, C2B domainInterproscan
IPR037733
all species →		DomainExtended synaptotagmin, C2A domainInterproscan
IPR031468
all species →		DomainSynaptotagmin-like mitochondrial-lipid-binding domainInterproscan
IPR039010
all species →		DomainSynaptotagmin, SMP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45761
all species →		EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005544
all species →		Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0008429
all species →		Molecular Functionphosphatidylethanolamine bindingInterproscan
GO:0031210
all species →		Molecular Functionphosphatidylcholine bindingInterproscan
GO:0031227
all species →		Cellular Componentobsolete intrinsic component of endoplasmic reticulum membraneInterproscan
GO:0031234
all species →		Cellular Componentextrinsic component of cytoplasmic side of plasma membraneInterproscan
GO:0035091
all species →		Molecular Functionphosphatidylinositol bindingInterproscan
GO:0006869
all species →		Biological Processlipid transportInterproscan
GO:0061817
all species →		Biological Processendoplasmic reticulum-plasma membrane tetheringInterproscan
GO:0008289
all species →		Molecular Functionlipid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016041-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016041-T1 global co-expression network
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