Detailed information of OS493_016150-T1 in Lophelia pertusa

Genomic Location: scaffold_49:1284806...1286712
NR annotation: KAJ7391860.1, hypothetical protein OS493_016150 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8FS75Large ribosomal subunit protein uL16 OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=rplP PE=3 SV=1
A4QBI8Large ribosomal subunit protein uL16 OS=Corynebacterium glutamicum (strain R) OX=340322 GN=rplP PE=3 SV=1
Q8NT00Large ribosomal subunit protein uL16 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534) OX=196627 GN=rplP PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006636 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00252
all species →		Ribosomal_L16Ribosomal protein L16p/L10eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000114
all species →		FamilyLarge ribosomal subunit protein uL16, bacterial-typeInterproscan
IPR036920
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL16 superfamilyInterproscan
IPR047873
all species →		FamilyLarge ribosomal subunit protein uL16Interproscan
IPR016180
all species →		DomainLarge ribosomal subunit protein uL16 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12220
all species →		50S/60S RIBOSOMAL PROTEIN L16Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0032543
all species →		Biological Processmitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016150-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016150-T1 global co-expression network
TOP