Detailed information of OS493_016263-T1 in Lophelia pertusa

Genomic Location: scaffold_49:2217380...2219705
NR annotation: KAJ7391956.1, Nuclear transport factor 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6CC82Nuclear transport factor 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=NTF2 PE=3 SV=1
Q6FRC6Nuclear transport factor 2 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=NTF2 PE=3 SV=1
Q6CQX4Nuclear transport factor 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=NTF2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008990 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02136
all species →		NTF2Nuclear transport factor 2 (NTF2) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032710
all species →		Homologous_superfamilyNTF2-like domain superfamilyInterproscan
IPR002075
all species →		DomainNuclear transport factor 2 domainInterproscan
IPR045875
all species →		FamilyNuclear transport factor 2Interproscan
IPR018222
all species →		DomainNuclear transport factor 2, eukaryoteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12612
all species →		NUCLEAR TRANSPORT FACTOR 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan
GO:0006913
all species →		Biological Processnucleocytoplasmic transportInterproscan
GO:0044613
all species →		Cellular Componentnuclear pore central transport channelInterproscan
GO:0061608
all species →		Molecular Functionnuclear import signal receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016263-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016263-T1 global co-expression network
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