Detailed information of OS493_016268-T1 in Lophelia pertusa

Genomic Location: scaffold_49:2259495...2268218
NR annotation: KAJ7391961.1, tooth eruption [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y5W9Sorting nexin-11 OS=Homo sapiens OX=9606 GN=SNX11 PE=1 SV=2
Q08DD7Sorting nexin-11 OS=Bos taurus OX=9913 GN=SNX11 PE=2 SV=1
Q91WL6Sorting nexin-11 OS=Mus musculus OX=10090 GN=Snx11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008245 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787
all species →		PXPX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001683
all species →		DomainPhox homologyInterproscan
IPR036871
all species →		Homologous_superfamilyPX domain superfamilyInterproscan
IPR043544
all species →		FamilySorting nexin-10/11Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46209
all species →		PX DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0035091
all species →		Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016050
all species →		Biological Processvesicle organizationInterproscan
GO:1901981
all species →		Molecular Functionphosphatidylinositol phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016268-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016268-T1 global co-expression network
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