Detailed information of OS493_016332-T1 in Lophelia pertusa

Genomic Location: scaffold_50:312201...316604
NR annotation: KAJ7385262.1, u3 small nucleolar ribonucleoprotein MPP10 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q810V0U3 small nucleolar ribonucleoprotein protein MPP10 OS=Mus musculus OX=10090 GN=Mphosph10 PE=1 SV=2
O00566U3 small nucleolar ribonucleoprotein protein MPP10 OS=Homo sapiens OX=9606 GN=MPHOSPH10 PE=1 SV=2
Q9FJY5M phase phosphoprotein 10 OS=Arabidopsis thaliana OX=3702 GN=MPP10 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007102 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04006
all species →		Mpp10Mpp10 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012173
all species →		FamilyU3 small nucleolar ribonucleoprotein complex, subunit Mpp10Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17039
all species →		U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005732
all species →		Cellular Componentsno(s)RNA-containing ribonucleoprotein complexInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0034457
all species →		Cellular ComponentMpp10 complexInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016332-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016332-T1 global co-expression network
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