Gene detail

Detailed information of OS493_016399-T1 in Lophelia pertusa

Genomic Location: scaffold_50:962476...965507
NR annotation: KAJ7385323.1, hypothetical protein OS493_016399 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8TBB5	Kelch domain-containing protein 4 OS=Homo sapiens OX=9606 GN=KLHDC4 PE=1 SV=1
Q5R8W1	Kelch domain-containing protein 4 OS=Pongo abelii OX=9601 GN=KLHDC4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002315 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan
PF13415 all species →	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR052257 all species →	Family	Kelch domain-containing E3 ubiquitin-protein ligase complex component	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46228 all species →	KELCH DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_016399-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_016399-T1 global co-expression network