Detailed information of OS493_016413-T1 in Lophelia pertusa

Genomic Location: scaffold_50:1077539...1080316
NR annotation: KAJ7385336.1, Pre-B-cell leukemia transcription factor 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B4F6V6Pre-B-cell leukemia transcription factor 1 OS=Xenopus tropicalis OX=8364 GN=pbx1 PE=2 SV=1
Q8QGC4Pre-B-cell leukemia transcription factor 1 OS=Xenopus laevis OX=8355 GN=pbx1 PE=1 SV=1
P40424Pre-B-cell leukemia transcription factor 1 OS=Homo sapiens OX=9606 GN=PBX1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005559 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03792
all species →		PBCPBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005542
all species →		DomainPBX, PBC domainInterproscan

 PANTHER
No PANTHER signature was detected for OS493_016413-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016413-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016413-T1 global co-expression network
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