Detailed information of OS493_016602-T1 in Lophelia pertusa

Genomic Location: scaffold_51:946309...959949
NR annotation: KAJ7379366.1, hypothetical protein OS493_016602 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y2I9TBC1 domain family member 30 OS=Homo sapiens OX=9606 GN=TBC1D30 PE=1 SV=2
Q28C33TBC1 domain family member 30 OS=Xenopus tropicalis OX=8364 GN=tbc1d30 PE=2 SV=1
Q69ZT9TBC1 domain family member 30 OS=Mus musculus OX=10090 GN=Tbc1d30 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004933 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13399
all species →		TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016602-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016602-T1 global co-expression network
TOP