Detailed information of OS493_016771-T1 in Lophelia pertusa

Genomic Location: scaffold_52:1248851...1254625
NR annotation: KAJ7372848.1, acyl-CoA dehydrogenase member 11 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B3DMA2Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1
Q80XL6Acyl-CoA dehydrogenase family member 11 OS=Mus musculus OX=10090 GN=Acad11 PE=1 SV=2
Q5ZHT1Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus OX=9031 GN=ACAD11 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001332 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00441
all species →		Acyl-CoA_dh_1Acyl-CoA dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050741
all species →		FamilyAcyl-CoA dehydrogenaseInterproscan
IPR036250
all species →		Homologous_superfamilyAcyl-CoA dehydrogenase-like, C-terminalInterproscan
IPR009075
all species →		DomainAcyl-CoA dehydrogenase/oxidase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48083
all species →		MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003995
all species →		Molecular Functionacyl-CoA dehydrogenase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0033539
all species →		Biological Processfatty acid beta-oxidation using acyl-CoA dehydrogenaseInterproscan
GO:0016627
all species →		Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016771-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016771-T1 global co-expression network
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