Detailed information of OS493_016772-T1 in Lophelia pertusa

Genomic Location: scaffold_52:1254685...1269142
NR annotation: KAJ7372849.1, acyl-CoA dehydrogenase member 11 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZHT1Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus OX=9031 GN=ACAD11 PE=2 SV=1
Q80XL6Acyl-CoA dehydrogenase family member 11 OS=Mus musculus OX=10090 GN=Acad11 PE=1 SV=2
Q709F0Acyl-CoA dehydrogenase family member 11 OS=Homo sapiens OX=9606 GN=ACAD11 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001332 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_016772-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR037069
all species →		Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal domain superfamilyInterproscan
IPR050741
all species →		FamilyAcyl-CoA dehydrogenaseInterproscan
IPR009100
all species →		Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48083
all species →		MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016627
all species →		Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0003995
all species →		Molecular Functionacyl-CoA dehydrogenase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0033539
all species →		Biological Processfatty acid beta-oxidation using acyl-CoA dehydrogenaseInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016772-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016772-T1 global co-expression network
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