Detailed information of OS493_016872-T1 in Lophelia pertusa

Genomic Location: scaffold_53:492154...523870
NR annotation: KAJ7360243.1, hypothetical protein OS493_016872 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000105 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan
PF13306
all species →		LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR050541
all species →		FamilyLeucine-rich repeat and transmembrane domain-containing proteinInterproscan
IPR026906
all species →		RepeatBspA-type LRR regionInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24369
all species →		ANTIGEN BSP, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_016872-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_016872-T1 global co-expression network
TOP