Gene detail

Detailed information of OS493_017416-T1 in Lophelia pertusa

Genomic Location: scaffold_55:2188150...2208786
NR annotation: KAJ7391718.1, Protein fam45a [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8E7G4	DENN domain-containing protein 10 OS=Danio rerio OX=7955 GN=dennd10 PE=2 SV=1
Q8TCE6	DENN domain-containing protein 10 OS=Homo sapiens OX=9606 GN=DENND10 PE=1 SV=1
Q9D8N2	DENN domain-containing protein 10 OS=Mus musculus OX=10090 GN=Dennd10 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006206 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08616 all species →	SPA	Stabilization of polarity axis	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042431 all species →	Family	DENN domain-containing protein 10	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28544 all species →	PROTEIN FAM45A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005770 all species →	Cellular Component	late endosome	Interproscan
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:2000641 all species →	Biological Process	regulation of early endosome to late endosome transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_017416-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_017416-T1 global co-expression network