Detailed information of OS493_017551-T1 in Lophelia pertusa

Genomic Location: scaffold_56:1680047...1708470
NR annotation: KAJ7385174.1, Cytoplasmic FMR1-interacting protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SQX6Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus OX=10090 GN=Cyfip2 PE=1 SV=2
Q6GQD1Cytoplasmic FMR1-interacting protein 2 OS=Xenopus laevis OX=8355 GN=cyfip2 PE=2 SV=1
Q5R414Cytoplasmic FMR1-interacting protein 2 OS=Pongo abelii OX=9601 GN=CYFIP2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003271 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05994
all species →		FragX_IPCytoplasmic Fragile-X interacting familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008081
all species →		FamilyCytoplasmic FMR1-interactingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12195
all species →		CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030833
all species →		Biological Processregulation of actin filament polymerizationInterproscan
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan
GO:0000340
all species →		Molecular FunctionRNA 7-methylguanosine cap bindingInterproscan
GO:0000902
all species →		Biological Processcell morphogenesisInterproscan
GO:0006417
all species →		Biological Processregulation of translationInterproscan
GO:0031209
all species →		Cellular ComponentSCAR complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017551-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017551-T1 global co-expression network
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