Detailed information of OS493_017605-T1 in Lophelia pertusa

Genomic Location: scaffold_57:35178...35702
NR annotation: KAJ7379107.1, hypothetical protein OS493_017605 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000631 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_017605-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039174
all species →		FamilyChondroitin sulfate ABC lyaseInterproscan
IPR011071
all species →		Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006027
all species →		Biological Processglycosaminoglycan catabolic processInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017605-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017605-T1 global co-expression network
TOP