Detailed information of OS493_017628-T1 in Lophelia pertusa

Genomic Location: scaffold_57:241573...251033
NR annotation: KAJ7379130.1, Coiled-coil domain containing 53 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RGJ6WASH complex subunit 3 OS=Danio rerio OX=7955 GN=washc3 PE=2 SV=1
Q9Y3C0WASH complex subunit 3 OS=Homo sapiens OX=9606 GN=WASHC3 PE=1 SV=1
Q9CR27WASH complex subunit 3 OS=Mus musculus OX=10090 GN=Washc3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006022 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10152
all species →		CCDC53Subunit CCDC53 of WASH complexCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019309
all species →		FamilyWASH complex subunit 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13015
all species →		PROTEIN AD-016-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006887
all species →		Biological ProcessexocytosisInterproscan
GO:0030041
all species →		Biological Processactin filament polymerizationInterproscan
GO:0071203
all species →		Cellular ComponentWASH complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017628-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017628-T1 global co-expression network
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