Detailed information of OS493_017632-T1 in Lophelia pertusa

Genomic Location: scaffold_57:300741...315605
NR annotation: KAJ7379134.1, Paladin [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DIR8Paladin OS=Xenopus tropicalis OX=8364 GN=pald1 PE=2 SV=1
Q8JHZ8Paladin OS=Gallus gallus OX=9031 GN=PALD1 PE=2 SV=2
Q803E0Paladin OS=Danio rerio OX=7955 GN=pald1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008381 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14566
all species →		PTPlike_phytaseInositol hexakisphosphateDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029021
all species →		Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR050561
all species →		FamilyProtein Tyrosine PhosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23339
all species →		TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004725
all species →		Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01104E3.1.3.48; protein-tyrosine phosphataseEC:3.1.3.48
Enzymes with EC numbers-deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017632-T1 global co-expression network
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