Detailed information of OS493_017726-T1 in Lophelia pertusa

Genomic Location: scaffold_57:1286235...1293719
NR annotation: KAJ7379219.1, hypothetical protein OS493_017726 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P53621Coatomer subunit alpha OS=Homo sapiens OX=9606 GN=COPA PE=1 SV=2
Q27954Coatomer subunit alpha OS=Bos taurus OX=9913 GN=COPA PE=1 SV=1
Q8CIE6Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004966 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06957
all species →		COPI_CCoatomer (COPI) alpha subunit C-terminusRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010714
all species →		DomainCoatomer, alpha subunit, C-terminalInterproscan

 PANTHER
No PANTHER signature was detected for OS493_017726-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030126
all species →		Cellular ComponentCOPI vesicle coatInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017726-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017726-T1 global co-expression network
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