Detailed information of OS493_017735-T1 in Lophelia pertusa

Genomic Location: scaffold_57:1365610...1366908
NR annotation: KAJ7379226.1, hypothetical protein OS493_017735 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P19971Thymidine phosphorylase OS=Homo sapiens OX=9606 GN=TYMP PE=1 SV=2
Q5FVR2Thymidine phosphorylase OS=Rattus norvegicus OX=10116 GN=Tymp PE=1 SV=1
Q99N42Thymidine phosphorylase OS=Mus musculus OX=10090 GN=Tymp PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005006 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00591
all species →		Glycos_transf_3Glycosyl transferase family, a/b domainFamilyInterproscan
PF02885
all species →		Glycos_trans_3NGlycosyl transferase family, helical bundle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035902
all species →		Homologous_superfamilyNucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamilyInterproscan
IPR000053
all species →		FamilyThymidine/pyrimidine-nucleoside phosphorylaseInterproscan
IPR017872
all species →		Conserved_sitePyrimidine-nucleoside phosphorylase, conserved siteInterproscan
IPR000312
all species →		DomainGlycosyl transferase, family 3Interproscan
IPR017459
all species →		DomainGlycosyl transferase family 3, N-terminal domainInterproscan
IPR036320
all species →		Homologous_superfamilyGlycosyl transferase family 3, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10515
all species →		THYMIDINE PHOSPHORYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004645
all species →		Molecular Function1,4-alpha-oligoglucan phosphorylase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006206
all species →		Biological Processpyrimidine nucleobase metabolic processInterproscan
GO:0016757
all species →		Molecular Functionglycosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017735-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017735-T1 global co-expression network
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