Detailed information of OS493_017795-T1 in Lophelia pertusa

Genomic Location: scaffold_57:1965113...1969231
NR annotation: KAJ7379282.1, Sperm-tail PG-rich repeat-containing protein 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08BC4Sperm-tail PG-rich repeat-containing protein 2 OS=Danio rerio OX=7955 GN=stpg2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005569 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07004
all species →		SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010736
all species →		RepeatSperm-tail PG-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35678
all species →		PROTEIN STPG4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001939
all species →		Cellular Componentfemale pronucleusInterproscan
GO:0001940
all species →		Cellular Componentmale pronucleusInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan
GO:0042585
all species →		Cellular Componentgerminal vesicleInterproscan
GO:0044727
all species →		Biological Processepigenetic programing of male pronucleusInterproscan
GO:1901537
all species →		Biological Processobsolete positive regulation of DNA demethylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017795-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017795-T1 global co-expression network
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