Detailed information of OS493_017796-T1 in Lophelia pertusa

Genomic Location: scaffold_57:1970047...1975234
NR annotation: KAJ7379283.1, Sperm-tail PG-rich repeat-containing protein 2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08BC4Sperm-tail PG-rich repeat-containing protein 2 OS=Danio rerio OX=7955 GN=stpg2 PE=2 SV=1
A1A5R9Sperm-tail PG-rich repeat-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Stpg2 PE=2 SV=1
Q8C8J0Sperm-tail PG-rich repeat-containing protein 2 OS=Mus musculus OX=10090 GN=Stpg2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005569 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07004
all species →		SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010736
all species →		RepeatSperm-tail PG-rich repeatInterproscan
IPR051291
all species →		FamilyCiliary Microtubule AssociatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21580
all species →		SHIPPO-1-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_017796-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017796-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017796-T1 global co-expression network
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