Detailed information of OS493_017864-T1 in Lophelia pertusa

Genomic Location: scaffold_58:221375...225802
NR annotation: KAJ7372593.1, hypothetical protein OS493_017864 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7UA95Ras-associating and dilute domain-containing protein OS=Danio rerio OX=7955 GN=radil PE=2 SV=1
Q96JH8Ras-associating and dilute domain-containing protein OS=Homo sapiens OX=9606 GN=RADIL PE=1 SV=5
Q69Z89Ras-associating and dilute domain-containing protein OS=Mus musculus OX=10090 GN=Radil PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005678 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR052072
all species →		FamilyVascular development regulator domain-containing proteinInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16027
all species →		DILUTE DOMAIN-CONTAINING PROTEIN YPR089WInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0051020
all species →		Molecular FunctionGTPase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_017864-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_017864-T1 global co-expression network
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