Detailed information of OS493_018029-T1 in Lophelia pertusa

Genomic Location: scaffold_58:1873423...1885934
NR annotation: KAJ7372751.1, Tuberous sclerosis 2-like protein [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49815Tuberin OS=Homo sapiens OX=9606 GN=TSC2 PE=1 SV=2
Q61037Tuberin OS=Mus musculus OX=10090 GN=Tsc2 PE=1 SV=1
P49816Tuberin OS=Rattus norvegicus OX=10116 GN=Tsc2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002253 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03542
all species →		TuberinTuberinFamilyInterproscan
PF11864
all species →		DUF3384Domain of unknown function (DUF3384)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027107
all species →		FamilyTuberin/Ral GTPase-activating protein subunit alphaInterproscan
IPR003913
all species →		FamilyTuberinInterproscan
IPR018515
all species →		DomainTuberin-type domainInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR024584
all species →		DomainTuberin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10063
all species →		TUBERINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005096
all species →		Molecular FunctionGTPase activator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0030178
all species →		Biological Processnegative regulation of Wnt signaling pathwayInterproscan
GO:0032007
all species →		Biological Processnegative regulation of TOR signalingInterproscan
GO:0033596
all species →		Cellular ComponentTSC1-TSC2 complexInterproscan
GO:0043547
all species →		Biological Processpositive regulation of GTPase activityInterproscan
GO:0046627
all species →		Biological Processnegative regulation of insulin receptor signaling pathwayInterproscan
GO:0051726
all species →		Biological Processregulation of cell cycleInterproscan
GO:0051898
all species →		Biological Processnegative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_018029-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018029-T1 global co-expression network
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