Detailed information of OS493_018105-T1 in Lophelia pertusa

Genomic Location: scaffold_59:542846...569568
NR annotation: KAJ7360120.1, hypothetical protein OS493_018105 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000631 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09093
all species →		Lyase_catalytLyase, catalyticRepeatInterproscan
PF09092
all species →		Lyase_NLyase, N terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039174
all species →		FamilyChondroitin sulfate ABC lyaseInterproscan
IPR008929
all species →		Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR015177
all species →		DomainLyase, catalyticInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR015176
all species →		DomainLyase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006027
all species →		Biological Processglycosaminoglycan catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_018105-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018105-T1 global co-expression network
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