Detailed information of OS493_018337-T1 in Lophelia pertusa

Genomic Location: scaffold_60:1789931...1796795
NR annotation: KAJ7333161.1, hypothetical protein OS493_018337 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0W2W6Protein maelstrom homolog OS=Culex quinquefasciatus OX=7176 GN=mael PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006787 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09011
all species →		HMG_box_2HMG-box domainDomainInterproscan
PF13017
all species →		MaelstrompiRNA pathway germ-plasm componentFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR039259
all species →		FamilyProtein maelstromInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR024970
all species →		DomainMaelstrom domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21358
all species →		PROTEIN MAELSTROM HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0007140
all species →		Biological Processmale meiotic nuclear divisionInterproscan
GO:0007283
all species →		Biological ProcessspermatogenesisInterproscan
GO:0034587
all species →		Biological ProcesspiRNA processingInterproscan
GO:0043186
all species →		Cellular ComponentP granuleInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045892
all species →		Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0060964
all species →		Biological Processregulation of miRNA-mediated gene silencingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_018337-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018337-T1 global co-expression network
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