Detailed information of OS493_018356-T1 in Lophelia pertusa

Genomic Location: scaffold_60:1891623...1893325
NR annotation: KAJ7333180.1, hypothetical protein OS493_018356 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000521 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00341
all species →		PDGFPDGF/VEGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000072
all species →		DomainPDGF/VEGF domainInterproscan
IPR029034
all species →		Homologous_superfamilyCystine-knot cytokineInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11633
all species →		PLATELET-DERIVED GROWTH FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008083
all species →		Molecular Functiongrowth factor activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0008284
all species →		Biological Processpositive regulation of cell population proliferationInterproscan
GO:0031954
all species →		Biological Processpositive regulation of protein autophosphorylationInterproscan
GO:0070851
all species →		Molecular Functiongrowth factor receptor bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_018356-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018356-T1 global co-expression network
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