Gene detail

Detailed information of OS493_018454-T1 in Lophelia pertusa

Genomic Location: scaffold_61:858221...861541
NR annotation: KAJ7391409.1, DnaJ sub B member 5 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UDY4	DnaJ homolog subfamily B member 4 OS=Homo sapiens OX=9606 GN=DNAJB4 PE=1 SV=1
Q5R8J8	DnaJ homolog subfamily B member 4 OS=Pongo abelii OX=9601 GN=DNAJB4 PE=2 SV=1
Q2KIT4	DnaJ homolog subfamily B member 4 OS=Bos taurus OX=9913 GN=DNAJB4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001066 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01556 all species →	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR008971 all species →	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR018253 all species →	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR002939 all species →	Domain	Chaperone DnaJ, C-terminal	Interproscan
IPR051339 all species →	Family	DnaJ homolog subfamily B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24078 all species →	DNAJ HOMOLOG SUBFAMILY C MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0051085 all species →	Biological Process	chaperone cofactor-dependent protein refolding	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09507	DNAJB1; DnaJ homolog subfamily B member 1	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_018454-T1 global co-expression network