Detailed information of OS493_018523-T1 in Lophelia pertusa

Genomic Location: scaffold_61:1538379...1541909
NR annotation: KAJ7391476.1, Transcription initiation protein SPT3 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75486Transcription initiation protein SPT3 homolog OS=Homo sapiens OX=9606 GN=SUPT3H PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004161 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_018523-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR003195
all species →		FamilyTranscription initiation factor IID, subunit 13Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11380
all species →		TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003713
all species →		Molecular Functiontranscription coactivator activityInterproscan
GO:0006366
all species →		Biological Processtranscription by RNA polymerase IIInterproscan
GO:0043966
all species →		Biological Processobsolete histone H3 acetylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_018523-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018523-T1 global co-expression network
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