Detailed information of OS493_018644-T1 in Lophelia pertusa

Genomic Location: scaffold_62:643784...649903
NR annotation: KAJ7384956.1, hypothetical protein OS493_018644 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002974 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01094
all species →		ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF04069
all species →		OpuACSubstrate binding domain of ABC-type glycine betaine transport systemFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028082
all species →		Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR001828
all species →		DomainReceptor, ligand binding regionInterproscan
IPR002455
all species →		FamilyGPCR family 3, GABA-B receptorInterproscan
IPR007210
all species →		DomainABC-type glycine betaine transport system, substrate-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10519
all species →		GABA-B RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0004965
all species →		Molecular FunctionG protein-coupled GABA receptor activityInterproscan
GO:0007186
all species →		Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0007214
all species →		Biological Processgamma-aminobutyric acid signaling pathwayInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0038039
all species →		Cellular ComponentG protein-coupled receptor heterodimeric complexInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0043190
all species →		Cellular ComponentATP-binding cassette (ABC) transporter complexInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_018644-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018644-T1 global co-expression network
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