Detailed information of OS493_018706-T1 in Lophelia pertusa

Genomic Location: scaffold_62:1337155...1340687
NR annotation: KAJ7385017.1, hypothetical protein OS493_018706 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BHL6Fanconi anemia core complex-associated protein 24 OS=Mus musculus OX=10090 GN=Faap24 PE=2 SV=1
Q2KHY5Fanconi anemia core complex-associated protein 24 OS=Bos taurus OX=9913 GN=FAAP24 PE=2 SV=1
Q9BTP7Fanconi anemia core complex-associated protein 24 OS=Homo sapiens OX=9606 GN=FAAP24 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003635 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17949
all species →		PNDFANCM pseudonuclease domainDomainInterproscan
PF14520
all species →		HHH_5Helix-hairpin-helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010994
all species →		Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR040646
all species →		DomainFanconi anemia core complex-associated protein 24, pseudonuclease domainInterproscan
IPR026985
all species →		FamilyFanconi anemia-associated protein of 24kDaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31786
all species →		FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 24Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0036297
all species →		Biological Processinterstrand cross-link repairInterproscan
GO:0043240
all species →		Cellular ComponentFanconi anaemia nuclear complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10898FAAP24; fanconi anemia-associated protein-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018706-T1 global co-expression network
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