Detailed information of OS493_018915-T1 in Lophelia pertusa

Genomic Location: scaffold_64:93724...105559
NR annotation: KAJ7372412.1, hypothetical protein OS493_018915 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P40954Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CHT3 PE=1 SV=2
P29029Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CTS1 PE=1 SV=2
P29026Chitinase 1 OS=Rhizopus oligosporus OX=4847 GN=CHI1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001026 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01607
all species →		CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF00704
all species →		Glyco_hydro_18Glycosyl hydrolases family 18DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002557
all species →		DomainChitin binding domainInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR001579
all species →		Active_siteGlycosyl hydrolases family 18 (GH18) active siteInterproscan
IPR036508
all species →		Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR050542
all species →		FamilyGlycosyl Hydrolase 18 Family ChitinasesInterproscan
IPR001223
all species →		DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR045321
all species →		DomainChitinase Cts1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45708
all species →		ENDOCHITINASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0008061
all species →		Molecular Functionchitin bindingInterproscan
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0004568
all species →		Molecular Functionchitinase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01183E3.2.1.14; chitinaseEC:3.2.1.14
Amino sugar and nucleotide sugar metabolismko00520deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_018915-T1 global co-expression network
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