Detailed information of OS493_019113-T1 in Lophelia pertusa

Genomic Location: scaffold_65:626522...632119
NR annotation: KAJ7360025.1, hypothetical protein OS493_019113 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UNH7Sorting nexin-6 OS=Homo sapiens OX=9606 GN=SNX6 PE=1 SV=1
Q6P8X1Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2
Q5R613Sorting nexin-6 OS=Pongo abelii OX=9601 GN=SNX6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004441 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09325
all species →		Vps5Vps5 C terminal likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027267
all species →		Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR015404
all species →		DomainSorting nexin/Vps5-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45850
all species →		SORTING NEXIN FAMILY MEMBERInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_019113-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_019113-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_019113-T1 global co-expression network
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